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MolecularMixture

A molecular mixture is a chemical mixture composed of two or more molecular entities with known concentration and stoichiometry.

classDiagram ChemicalMixture <|-- MolecularMixture MolecularMixture : available_from MolecularMixture : category MolecularMixture : description MolecularMixture : drug_regulatory_status_world_wide MolecularMixture : has_attribute MolecularMixture : has_chemical_role MolecularMixture : highest_FDA_approval_status MolecularMixture : id MolecularMixture : iri MolecularMixture : is_supplement MolecularMixture : is_toxic MolecularMixture : max_tolerated_dose MolecularMixture : name MolecularMixture : provided_by MolecularMixture : routes_of_delivery MolecularMixture : source MolecularMixture : trade_name MolecularMixture : type MolecularMixture : xref

Parent Classes

  • Entity
    • NamedThing
      • ChemicalEntity [ physical essence chemical or drug or treatment chemical entity or gene or gene product chemical entity or protein or polypeptide]

Children

  • Entity
    • NamedThing
      • ChemicalEntity [ physical essence chemical or drug or treatment chemical entity or gene or gene product chemical entity or protein or polypeptide]

Slots

Name Description
available_from
category Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the biolink entity type class. In a neo4j database this MAY correspond to the neo4j label tag. In an RDF database it should be a biolink model class URI. This field is multi-valued. It should include values for ancestors of the biolink class; for example, a protein such as Shh would have category values biolink:Protein, biolink:GeneProduct, biolink:MolecularEntity, etc. In an RDF database, nodes will typically have an rdf:type triples. This can be to the most specific biolink class, or potentially to a class more specific than something in biolink. For example, a sequence feature f may have a rdf:type assertion to a SO class such as TF_binding_site, which is more specific than anything in biolink. Here we would have categories {biolink:GenomicEntity, biolink:MolecularEntity, biolink:NamedThing}
description a human-readable description of an entity
drug_regulatory_status_world_wide An agglomeration of drug regulatory status worldwide. Not specific to FDA.
has_attribute connects any entity to an attribute
has_chemical_role A role is particular behaviour which a material entity may exhibit.
highest_FDA_approval_status Should be the highest level of FDA approval this chemical entity or device has, regardless of which disease, condition or phenotype it is currently being reviewed to treat. For specific levels of FDA approval for a specific condition, disease, phenotype, etc., see the association slot, 'FDA approval status.'
id A unique identifier for an entity. Must be either a CURIE shorthand for a URI or a complete URI
iri An IRI for an entity. This is determined by the id using expansion rules.
is_supplement
is_toxic
max_tolerated_dose The highest dose of a drug or treatment that does not cause unacceptable side effects. The maximum tolerated dose is determined in clinical trials by testing increasing doses on different groups of people until the highest dose with acceptable side effects is found. Also called MTD.
name A human-readable name for an attribute or entity.
provided_by The value in this node property represents the knowledge provider that created or assembled the node and all of its attributes. Used internally to represent how a particular node made its way into a knowledge provider or graph.
routes_of_delivery the method or process of administering a pharmaceutical compound to achieve a therapeutic effect in humans or animals.
source None
trade_name
type None
xref Alternate CURIEs for a thing

Mappings

Mapping Type Mapped Value
self ['https://w3id.org/biolink/biolink-model/:MolecularMixture']
native ['https://w3id.org/biolink/biolink-model/:MolecularMixture']