Treatment
A treatment is targeted at a disease or phenotype and may involve multiple drug 'exposures', medical devices and/or procedures
classDiagram
ExposureEvent <|-- Treatment
ChemicalOrDrugOrTreatment <|-- Treatment
NamedThing <|-- Treatment
Treatment : category
Treatment : description
Treatment : has_attribute
Treatment : has_device
Treatment : has_drug
Treatment : has_procedure
Treatment : id
Treatment : iri
Treatment : name
Treatment : provided_by
Treatment : source
Treatment : timepoint
Treatment : type
Treatment : xref
Parent Classes
- Entity
- NamedThing
- Treatment [ exposure event chemical or drug or treatment]
- NamedThing
Slots
| Name | Description |
|---|---|
| category | Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the biolink entity type class. In a neo4j database this MAY correspond to the neo4j label tag. In an RDF database it should be a biolink model class URI. This field is multi-valued. It should include values for ancestors of the biolink class; for example, a protein such as Shh would have category values biolink:Protein, biolink:GeneProduct, biolink:MolecularEntity, etc. In an RDF database, nodes will typically have an rdf:type triples. This can be to the most specific biolink class, or potentially to a class more specific than something in biolink. For example, a sequence feature f may have a rdf:type assertion to a SO class such as TF_binding_site, which is more specific than anything in biolink. Here we would have categories {biolink:GenomicEntity, biolink:MolecularEntity, biolink:NamedThing} |
| description | a human-readable description of an entity |
| has_attribute | connects any entity to an attribute |
| has_device | connects an entity to one or more (medical) devices |
| has_drug | connects an entity to one or more drugs |
| has_procedure | connects an entity to one or more (medical) procedures |
| id | A unique identifier for an entity. Must be either a CURIE shorthand for a URI or a complete URI |
| iri | An IRI for an entity. This is determined by the id using expansion rules. |
| name | A human-readable name for an attribute or entity. |
| provided_by | The value in this node property represents the knowledge provider that created or assembled the node and all of its attributes. Used internally to represent how a particular node made its way into a knowledge provider or graph. |
| source | None |
| timepoint | a point in time |
| type | None |
| xref | Alternate CURIEs for a thing |
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | ['https://w3id.org/biolink/biolink-model/:Treatment'] |
| native | ['https://w3id.org/biolink/biolink-model/:Treatment'] |
| exact | ['OGMS:0000090', 'SIO:001398'] |
| broad | ['MAXO:0000058'] |