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Class: AnatomicalEntityToAnatomicalEntityPartOfAssociation

A relationship between two anatomical entities where the relationship is mereological, i.e the two entities are related by parthood. This includes relationships between cellular components and cells, between cells and tissues, tissues and whole organisms

URI: biolink:AnatomicalEntityToAnatomicalEntityPartOfAssociation

classDiagram class AnatomicalEntityToAnatomicalEntityPartOfAssociation AnatomicalEntityToAnatomicalEntityAssociation <|-- AnatomicalEntityToAnatomicalEntityPartOfAssociation AnatomicalEntityToAnatomicalEntityPartOfAssociation : aggregator_knowledge_source AnatomicalEntityToAnatomicalEntityPartOfAssociation : category AnatomicalEntityToAnatomicalEntityPartOfAssociation : description AnatomicalEntityToAnatomicalEntityPartOfAssociation : has_attribute AnatomicalEntityToAnatomicalEntityPartOfAssociation --|> attribute : has_attribute AnatomicalEntityToAnatomicalEntityPartOfAssociation : has_evidence AnatomicalEntityToAnatomicalEntityPartOfAssociation --|> evidence type : has_evidence AnatomicalEntityToAnatomicalEntityPartOfAssociation : id AnatomicalEntityToAnatomicalEntityPartOfAssociation : iri AnatomicalEntityToAnatomicalEntityPartOfAssociation : knowledge_source AnatomicalEntityToAnatomicalEntityPartOfAssociation : name AnatomicalEntityToAnatomicalEntityPartOfAssociation : negated AnatomicalEntityToAnatomicalEntityPartOfAssociation : object AnatomicalEntityToAnatomicalEntityPartOfAssociation --|> anatomical entity : object AnatomicalEntityToAnatomicalEntityPartOfAssociation : object_category AnatomicalEntityToAnatomicalEntityPartOfAssociation --|> ontology class : object_category AnatomicalEntityToAnatomicalEntityPartOfAssociation : object_category_closure AnatomicalEntityToAnatomicalEntityPartOfAssociation --|> ontology class : object_category_closure AnatomicalEntityToAnatomicalEntityPartOfAssociation : object_closure AnatomicalEntityToAnatomicalEntityPartOfAssociation : object_label_closure AnatomicalEntityToAnatomicalEntityPartOfAssociation : object_namespace AnatomicalEntityToAnatomicalEntityPartOfAssociation : original_object AnatomicalEntityToAnatomicalEntityPartOfAssociation : original_predicate AnatomicalEntityToAnatomicalEntityPartOfAssociation : original_subject AnatomicalEntityToAnatomicalEntityPartOfAssociation : predicate AnatomicalEntityToAnatomicalEntityPartOfAssociation : primary_knowledge_source AnatomicalEntityToAnatomicalEntityPartOfAssociation : publications AnatomicalEntityToAnatomicalEntityPartOfAssociation --|> publication : publications AnatomicalEntityToAnatomicalEntityPartOfAssociation : qualifiers AnatomicalEntityToAnatomicalEntityPartOfAssociation --|> ontology class : qualifiers AnatomicalEntityToAnatomicalEntityPartOfAssociation : retrieval_source_ids AnatomicalEntityToAnatomicalEntityPartOfAssociation --|> retrieval source : retrieval_source_ids AnatomicalEntityToAnatomicalEntityPartOfAssociation : subject AnatomicalEntityToAnatomicalEntityPartOfAssociation --|> anatomical entity : subject AnatomicalEntityToAnatomicalEntityPartOfAssociation : subject_category AnatomicalEntityToAnatomicalEntityPartOfAssociation --|> ontology class : subject_category AnatomicalEntityToAnatomicalEntityPartOfAssociation : subject_category_closure AnatomicalEntityToAnatomicalEntityPartOfAssociation --|> ontology class : subject_category_closure AnatomicalEntityToAnatomicalEntityPartOfAssociation : subject_closure AnatomicalEntityToAnatomicalEntityPartOfAssociation : subject_label_closure AnatomicalEntityToAnatomicalEntityPartOfAssociation : subject_namespace AnatomicalEntityToAnatomicalEntityPartOfAssociation : timepoint AnatomicalEntityToAnatomicalEntityPartOfAssociation : type

Inheritance

Slots

Name Cardinality and Range Description Inheritance
subject 1..1
AnatomicalEntity		 the part Association
predicate 1..1
PredicateType		 A high-level grouping for the relationship type Association
object 1..1
AnatomicalEntity		 the whole Association
negated 0..1
Boolean		 if set to true, then the association is negated i Association
qualifiers 0..*
OntologyClass		 connects an association to qualifiers that modify or qualify the meaning of t... Association
publications 0..*
Publication		 One or more publications that report the statement expressed in an Associati... Association
has_evidence 0..*
EvidenceType		 connects an association to an instance of supporting evidence Association
knowledge_source 0..1
String		 An Information Resource from which the knowledge expressed in an Association ... Association
primary_knowledge_source 0..1
String		 The most upstream source of the knowledge expressed in an Association that an... Association
aggregator_knowledge_source 0..*
String		 An intermediate aggregator resource from which knowledge expressed in an Asso... Association
timepoint 0..1
TimeType		 a point in time Association
original_subject 0..1
String		 used to hold the original subject of a relation (or predicate) that an extern... Association
original_predicate 0..1
Uriorcurie		 used to hold the original relation/predicate that an external knowledge sourc... Association
original_object 0..1
String		 used to hold the original object of a relation (or predicate) that an externa... Association
subject_category 0..1
OntologyClass		 Used to hold the biolink class/category of an association Association
object_category 0..1
OntologyClass		 Used to hold the biolink class/category of an association Association
subject_closure 0..*
String		 Used to hold the subject closure of an association Association
object_closure 0..*
String		 Used to hold the object closure of an association Association
subject_category_closure 0..*
OntologyClass		 Used to hold the subject category closure of an association Association
object_category_closure 0..*
OntologyClass		 Used to hold the object category closure of an association Association
subject_namespace 0..1
String		 Used to hold the subject namespace of an association Association
object_namespace 0..1
String		 Used to hold the object namespace of an association Association
subject_label_closure 0..*
String		 Used to hold the subject label closure of an association Association
object_label_closure 0..*
String		 Used to hold the object label closure of an association Association
retrieval_source_ids 0..*
RetrievalSource		 A list of retrieval sources that served as a source of knowledge expressed in... Association
id 1..1
String		 A unique identifier for an entity Entity
iri 0..1
IriType		 An IRI for an entity Entity
category 0..*
CategoryType		 Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String		 rdf:type of biolink:Association should be fixed at rdf:Statement Entity
name 0..1
LabelType		 A human-readable name for an attribute or entity Entity
description 0..1
NarrativeText		 a human-readable description of an entity Entity
has_attribute 0..*
Attribute		 connects any entity to an attribute Entity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:AnatomicalEntityToAnatomicalEntityPartOfAssociation
native biolink:AnatomicalEntityToAnatomicalEntityPartOfAssociation

LinkML Source

Direct

name: anatomical entity to anatomical entity part of association
description: A relationship between two anatomical entities where the relationship
  is mereological, i.e the two entities are related by parthood. This includes relationships
  between cellular components and cells, between cells and tissues, tissues and whole
  organisms
from_schema: https://w3id.org/biolink/biolink-model
is_a: anatomical entity to anatomical entity association
slot_usage:
  subject:
    name: subject
    description: the part
    domain_of:
    - association
    range: anatomical entity
  object:
    name: object
    description: the whole
    domain_of:
    - association
    range: anatomical entity
  predicate:
    name: predicate
    domain_of:
    - predicate mapping
    - association
    subproperty_of: part of
defining_slots:
- predicate