Skip to content

Class: CellLineToDiseaseOrPhenotypicFeatureAssociation

An relationship between a cell line and a disease or a phenotype, where the cell line is derived from an individual with that disease or phenotype.

URI: biolink:CellLineToDiseaseOrPhenotypicFeatureAssociation

classDiagram class CellLineToDiseaseOrPhenotypicFeatureAssociation CellLineToEntityAssociationMixin <|-- CellLineToDiseaseOrPhenotypicFeatureAssociation EntityToDiseaseOrPhenotypicFeatureAssociationMixin <|-- CellLineToDiseaseOrPhenotypicFeatureAssociation Association <|-- CellLineToDiseaseOrPhenotypicFeatureAssociation CellLineToDiseaseOrPhenotypicFeatureAssociation <|-- CellLineAsAModelOfDiseaseAssociation CellLineToDiseaseOrPhenotypicFeatureAssociation : aggregator_knowledge_source CellLineToDiseaseOrPhenotypicFeatureAssociation : category CellLineToDiseaseOrPhenotypicFeatureAssociation : description CellLineToDiseaseOrPhenotypicFeatureAssociation : has_attribute CellLineToDiseaseOrPhenotypicFeatureAssociation --|> attribute : has_attribute CellLineToDiseaseOrPhenotypicFeatureAssociation : has_evidence CellLineToDiseaseOrPhenotypicFeatureAssociation --|> evidence type : has_evidence CellLineToDiseaseOrPhenotypicFeatureAssociation : id CellLineToDiseaseOrPhenotypicFeatureAssociation : iri CellLineToDiseaseOrPhenotypicFeatureAssociation : knowledge_source CellLineToDiseaseOrPhenotypicFeatureAssociation : name CellLineToDiseaseOrPhenotypicFeatureAssociation : negated CellLineToDiseaseOrPhenotypicFeatureAssociation : object CellLineToDiseaseOrPhenotypicFeatureAssociation --|> disease or phenotypic feature : object CellLineToDiseaseOrPhenotypicFeatureAssociation : object_category CellLineToDiseaseOrPhenotypicFeatureAssociation --|> ontology class : object_category CellLineToDiseaseOrPhenotypicFeatureAssociation : object_category_closure CellLineToDiseaseOrPhenotypicFeatureAssociation --|> ontology class : object_category_closure CellLineToDiseaseOrPhenotypicFeatureAssociation : object_closure CellLineToDiseaseOrPhenotypicFeatureAssociation : object_label_closure CellLineToDiseaseOrPhenotypicFeatureAssociation : object_namespace CellLineToDiseaseOrPhenotypicFeatureAssociation : original_object CellLineToDiseaseOrPhenotypicFeatureAssociation : original_predicate CellLineToDiseaseOrPhenotypicFeatureAssociation : original_subject CellLineToDiseaseOrPhenotypicFeatureAssociation : predicate CellLineToDiseaseOrPhenotypicFeatureAssociation : primary_knowledge_source CellLineToDiseaseOrPhenotypicFeatureAssociation : publications CellLineToDiseaseOrPhenotypicFeatureAssociation --|> publication : publications CellLineToDiseaseOrPhenotypicFeatureAssociation : qualifiers CellLineToDiseaseOrPhenotypicFeatureAssociation --|> ontology class : qualifiers CellLineToDiseaseOrPhenotypicFeatureAssociation : retrieval_source_ids CellLineToDiseaseOrPhenotypicFeatureAssociation --|> retrieval source : retrieval_source_ids CellLineToDiseaseOrPhenotypicFeatureAssociation : subject CellLineToDiseaseOrPhenotypicFeatureAssociation --|> disease or phenotypic feature : subject CellLineToDiseaseOrPhenotypicFeatureAssociation : subject_category CellLineToDiseaseOrPhenotypicFeatureAssociation --|> ontology class : subject_category CellLineToDiseaseOrPhenotypicFeatureAssociation : subject_category_closure CellLineToDiseaseOrPhenotypicFeatureAssociation --|> ontology class : subject_category_closure CellLineToDiseaseOrPhenotypicFeatureAssociation : subject_closure CellLineToDiseaseOrPhenotypicFeatureAssociation : subject_label_closure CellLineToDiseaseOrPhenotypicFeatureAssociation : subject_namespace CellLineToDiseaseOrPhenotypicFeatureAssociation : timepoint CellLineToDiseaseOrPhenotypicFeatureAssociation : type

Inheritance

Slots

Name Cardinality and Range Description Inheritance
subject 1..1
DiseaseOrPhenotypicFeature
connects an association to the subject of the association Association
predicate 1..1
PredicateType
A high-level grouping for the relationship type Association
object 1..1
DiseaseOrPhenotypicFeature
disease or phenotype Association
negated 0..1
Boolean
if set to true, then the association is negated i Association
qualifiers 0..*
OntologyClass
connects an association to qualifiers that modify or qualify the meaning of t... Association
publications 0..*
Publication
One or more publications that report the statement expressed in an Associati... Association
has_evidence 0..*
EvidenceType
connects an association to an instance of supporting evidence Association
knowledge_source 0..1
String
An Information Resource from which the knowledge expressed in an Association ... Association
primary_knowledge_source 0..1
String
The most upstream source of the knowledge expressed in an Association that an... Association
aggregator_knowledge_source 0..*
String
An intermediate aggregator resource from which knowledge expressed in an Asso... Association
timepoint 0..1
TimeType
a point in time Association
original_subject 0..1
String
used to hold the original subject of a relation (or predicate) that an extern... Association
original_predicate 0..1
Uriorcurie
used to hold the original relation/predicate that an external knowledge sourc... Association
original_object 0..1
String
used to hold the original object of a relation (or predicate) that an externa... Association
subject_category 0..1
OntologyClass
Used to hold the biolink class/category of an association Association
object_category 0..1
OntologyClass
Used to hold the biolink class/category of an association Association
subject_closure 0..*
String
Used to hold the subject closure of an association Association
object_closure 0..*
String
Used to hold the object closure of an association Association
subject_category_closure 0..*
OntologyClass
Used to hold the subject category closure of an association Association
object_category_closure 0..*
OntologyClass
Used to hold the object category closure of an association Association
subject_namespace 0..1
String
Used to hold the subject namespace of an association Association
object_namespace 0..1
String
Used to hold the object namespace of an association Association
subject_label_closure 0..*
String
Used to hold the subject label closure of an association Association
object_label_closure 0..*
String
Used to hold the object label closure of an association Association
retrieval_source_ids 0..*
RetrievalSource
A list of retrieval sources that served as a source of knowledge expressed in... Association
id 1..1
String
A unique identifier for an entity Entity
iri 0..1
IriType
An IRI for an entity Entity
category 0..*
CategoryType
Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String
rdf:type of biolink:Association should be fixed at rdf:Statement Entity
name 0..1
LabelType
A human-readable name for an attribute or entity Entity
description 0..1
NarrativeText
a human-readable description of an entity Entity
has_attribute 0..*
Attribute
connects any entity to an attribute Entity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:CellLineToDiseaseOrPhenotypicFeatureAssociation
native biolink:CellLineToDiseaseOrPhenotypicFeatureAssociation

LinkML Source

Direct

name: cell line to disease or phenotypic feature association
description: An relationship between a cell line and a disease or a phenotype, where
  the cell line is derived from an individual with that disease or phenotype.
from_schema: https://w3id.org/biolink/biolink-model
is_a: association
mixins:
- cell line to entity association mixin
- entity to disease or phenotypic feature association mixin
slot_usage:
  subject:
    name: subject
    domain_of:
    - association
    range: disease or phenotypic feature