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Class: ClinicalMeasurement

A clinical measurement is a special kind of attribute which results from a laboratory observation from a subject individual or sample. Measurements can be connected to their subject by the 'has attribute' slot.

URI: biolink:ClinicalMeasurement

classDiagram class ClinicalMeasurement ClinicalAttribute <|-- ClinicalMeasurement ClinicalMeasurement : category ClinicalMeasurement : description ClinicalMeasurement : full_name ClinicalMeasurement : has_attribute ClinicalMeasurement --|> attribute : has_attribute ClinicalMeasurement : has_attribute_type ClinicalMeasurement --|> ontology class : has_attribute_type ClinicalMeasurement : has_qualitative_value ClinicalMeasurement --|> named thing : has_qualitative_value ClinicalMeasurement : has_quantitative_value ClinicalMeasurement --|> quantity value : has_quantitative_value ClinicalMeasurement : id ClinicalMeasurement : iri ClinicalMeasurement : name ClinicalMeasurement : provided_by ClinicalMeasurement : synonym ClinicalMeasurement : type ClinicalMeasurement : xref

Inheritance

Slots

Name Cardinality and Range Description Inheritance
name 0..1
LabelType		 The human-readable 'attribute name' can be set to a string which reflects its... Attribute, Entity
has_attribute_type 1..1
OntologyClass		 connects an attribute to a class that describes it Attribute
has_quantitative_value 0..*
QuantityValue		 connects an attribute to a value Attribute
has_qualitative_value 0..1
NamedThing		 connects an attribute to a value Attribute
iri 0..1
IriType		 An IRI for an entity Attribute, Entity
id 1..1
String		 A unique identifier for an entity Entity, OntologyClass
provided_by 0..*
String		 The value in this node property represents the knowledge provider that create... NamedThing
xref 0..*
Uriorcurie		 A database cross reference or alternative identifier for a NamedThing or edge... NamedThing
full_name 0..1
LabelType		 a long-form human readable name for a thing NamedThing
synonym 0..*
LabelType		 Alternate human-readable names for a thing NamedThing
category 1..*
CategoryType		 Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String		 Entity
description 0..1
NarrativeText		 a human-readable description of an entity Entity
has_attribute 0..*
Attribute		 connects any entity to an attribute Entity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:ClinicalMeasurement
native biolink:ClinicalMeasurement
exact EFO:0001444

LinkML Source

Direct

name: clinical measurement
description: A clinical measurement is a special kind of attribute which results from
  a laboratory observation from a subject individual or sample. Measurements can be
  connected to their subject by the 'has attribute' slot.
from_schema: https://w3id.org/biolink/biolink-model
exact_mappings:
- EFO:0001444
is_a: clinical attribute
slot_usage:
  has attribute type:
    name: has attribute type
    values_from:
    - EFO
    - LOINC
    multivalued: false
    domain_of:
    - attribute
    required: true