Class: Disease
A disorder of structure or function, especially one that produces specific signs, phenotypes or symptoms or that affects a specific location and is not simply a direct result of physical injury. A disposition to undergo pathological processes that exists in an organism because of one or more disorders in that organism.
URI: biolink:Disease
classDiagram
class Disease
DiseaseOrPhenotypicFeature <|-- Disease
Disease : category
Disease : description
Disease : full_name
Disease : has_attribute
Disease --|> attribute : has_attribute
Disease : id
Disease : in_taxon
Disease --|> organism taxon : in_taxon
Disease : in_taxon_label
Disease : iri
Disease : name
Disease : provided_by
Disease : synonym
Disease : type
Disease : xref
Inheritance
Slots
| Name | Cardinality and Range | Description | Inheritance |
|---|---|---|---|
| in_taxon | 0..* OrganismTaxon |
connects an entity to its taxonomic classification | ThingWithTaxon |
| in_taxon_label | 0..1 LabelType |
The human readable scientific name for the taxon of the entity | ThingWithTaxon |
| provided_by | 0..* String |
The value in this node property represents the knowledge provider that create... | NamedThing |
| xref | 0..* Uriorcurie |
A database cross reference or alternative identifier for a NamedThing or edge... | NamedThing |
| full_name | 0..1 LabelType |
a long-form human readable name for a thing | NamedThing |
| synonym | 0..* LabelType |
Alternate human-readable names for a thing | NamedThing |
| id | 1..1 String |
A unique identifier for an entity | Entity |
| iri | 0..1 IriType |
An IRI for an entity | Entity |
| category | 1..* CategoryType |
Name of the high level ontology class in which this entity is categorized | Entity |
| type | 0..* String |
Entity | |
| name | 0..1 LabelType |
A human-readable name for an attribute or entity | Entity |
| description | 0..1 NarrativeText |
a human-readable description of an entity | Entity |
| has_attribute | 0..* Attribute |
connects any entity to an attribute | Entity |
Usages
Aliases
- condition
- disorder
- medical condition
Identifier and Mapping Information
Valid ID Prefixes
Instances of this class should have identifiers with one of the following prefixes:
-
MONDO
-
DOID
-
OMIM
-
OMIM.PS
-
orphanet
-
EFO
-
UMLS
-
MESH
-
MEDDRA
-
NCIT
-
SNOMEDCT
-
medgen
-
ICD10
-
ICD9
-
KEGG.DISEASE
-
HP
-
MP
-
PHARMGKB.DISEASE
Schema Source
- from schema: https://w3id.org/biolink/biolink-model
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | biolink:Disease |
| native | biolink:Disease |
| exact | MONDO:0000001, DOID:4, NCIT:C2991, WIKIDATA:Q12136, SIO:010299, UMLSSG:DISO, STY:T047, dcid:Disease |
| narrow | STY:T019, STY:T020, STY:T048, STY:T049, STY:T190, STY:T191, MONDO:0042489 |
LinkML Source
Direct
name: disease
id_prefixes:
- MONDO
- DOID
- OMIM
- OMIM.PS
- orphanet
- EFO
- UMLS
- MESH
- MEDDRA
- NCIT
- SNOMEDCT
- medgen
- ICD10
- ICD9
- KEGG.DISEASE
- HP
- MP
- PHARMGKB.DISEASE
description: A disorder of structure or function, especially one that produces specific signs,
phenotypes or symptoms or that affects a specific location and is not simply a direct
result of physical injury. A disposition to undergo pathological processes that
exists in an organism because of one or more disorders in that organism.
in_subset:
- model_organism_database
- translator_minimal
from_schema: https://w3id.org/biolink/biolink-model
aliases:
- condition
- disorder
- medical condition
exact_mappings:
- MONDO:0000001
- DOID:4
- NCIT:C2991
- WIKIDATA:Q12136
- SIO:010299
- UMLSSG:DISO
- STY:T047
- dcid:Disease
narrow_mappings:
- STY:T019
- STY:T020
- STY:T048
- STY:T049
- STY:T190
- STY:T191
- MONDO:0042489
is_a: disease or phenotypic feature