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Class: Exon

A region of the transcript sequence within a gene which is not removed from the primary RNA transcript by RNA splicing.

URI: biolink:Exon

classDiagram class Exon NucleicAcidEntity <|-- Exon Exon : available_from Exon --|> DrugAvailabilityEnum : available_from Exon : category Exon : description Exon : full_name Exon : has_attribute Exon --|> attribute : has_attribute Exon : has_biological_sequence Exon : has_chemical_role Exon --|> chemical role : has_chemical_role Exon : id Exon : in_taxon Exon --|> organism taxon : in_taxon Exon : in_taxon_label Exon : iri Exon : is_metabolite Exon : is_toxic Exon : max_tolerated_dose Exon : name Exon : provided_by Exon : synonym Exon : trade_name Exon --|> chemical entity : trade_name Exon : type Exon : xref

Inheritance

Slots

Name Cardinality and Range Description Inheritance
has_biological_sequence 0..1
BiologicalSequence
connects a genomic feature to its sequence GenomicEntity
in_taxon 0..*
OrganismTaxon
connects an entity to its taxonomic classification ThingWithTaxon
in_taxon_label 0..1
LabelType
The human readable scientific name for the taxon of the entity ThingWithTaxon
id 1..1
String
A unique identifier for an entity Entity, OntologyClass
is_metabolite 0..1
Boolean
indicates whether a molecular entity is a metabolite MolecularEntity
trade_name 0..1
ChemicalEntity
ChemicalEntity
available_from 0..*
DrugAvailabilityEnum
ChemicalEntity
max_tolerated_dose 0..1
String
The highest dose of a drug or treatment that does not cause unacceptable side... ChemicalEntity
is_toxic 0..1
Boolean
ChemicalEntity
has_chemical_role 0..*
ChemicalRole
A role is particular behaviour which a chemical entity may exhibit ChemicalEntity
provided_by 0..*
String
The value in this node property represents the knowledge provider that create... NamedThing
xref 0..*
Uriorcurie
A database cross reference or alternative identifier for a NamedThing or edge... NamedThing
full_name 0..1
LabelType
a long-form human readable name for a thing NamedThing
synonym 0..*
LabelType
Alternate human-readable names for a thing NamedThing
iri 0..1
IriType
An IRI for an entity Entity
category 1..*
CategoryType
Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String
Entity
name 0..1
LabelType
A human-readable name for an attribute or entity Entity
description 0..1
NarrativeText
a human-readable description of an entity Entity
has_attribute 0..*
Attribute
connects any entity to an attribute Entity

Usages

used by used in type used
ExonToTranscriptRelationship subject range Exon

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:Exon
native biolink:Exon
exact SO:0000147, SIO:010445, WIKIDATA:Q373027

LinkML Source

Direct

name: exon
description: A region of the transcript sequence within a gene which is not removed
  from the primary RNA transcript by RNA splicing.
from_schema: https://w3id.org/biolink/biolink-model
exact_mappings:
- SO:0000147
- SIO:010445
- WIKIDATA:Q373027
is_a: nucleic acid entity