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Class: LifeStage

A stage of development or growth of an organism, including post-natal adult stages

URI: biolink:LifeStage

classDiagram class LifeStage OrganismalEntity <|-- LifeStage LifeStage : category LifeStage : description LifeStage : full_name LifeStage : has_attribute LifeStage --|> attribute : has_attribute LifeStage : id LifeStage : in_taxon LifeStage --|> organism taxon : in_taxon LifeStage : in_taxon_label LifeStage : iri LifeStage : name LifeStage : provided_by LifeStage : synonym LifeStage : type LifeStage : xref

Inheritance

Slots

Name Cardinality and Range Description Inheritance
in_taxon 0..*
OrganismTaxon		 connects an entity to its taxonomic classification ThingWithTaxon
in_taxon_label 0..1
LabelType		 The human readable scientific name for the taxon of the entity ThingWithTaxon
provided_by 0..*
String		 The value in this node property represents the knowledge provider that create... NamedThing
xref 0..*
Uriorcurie		 A database cross reference or alternative identifier for a NamedThing or edge... NamedThing
full_name 0..1
LabelType		 a long-form human readable name for a thing NamedThing
synonym 0..*
LabelType		 Alternate human-readable names for a thing NamedThing
id 1..1
String		 A unique identifier for an entity Entity
iri 0..1
IriType		 An IRI for an entity Entity
category 1..*
CategoryType		 Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String		 Entity
name 0..1
LabelType		 A human-readable name for an attribute or entity Entity
description 0..1
NarrativeText		 a human-readable description of an entity Entity
has_attribute 0..*
Attribute		 may often be an organism attribute Entity

Usages

used by used in type used
GeneExpressionMixin stage_qualifier range LifeStage
GeneToGeneCoexpressionAssociation stage_qualifier range LifeStage
VariantToGeneExpressionAssociation stage_qualifier range LifeStage
GeneToExpressionSiteAssociation stage_qualifier range LifeStage

Identifier and Mapping Information

Valid ID Prefixes

Instances of this class should have identifiers with one of the following prefixes:

  • HsapDv

  • MmusDv

  • ZFS

  • FBdv

  • WBls

  • UBERON

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:LifeStage
native biolink:LifeStage
exact UBERON:0000105
narrow HsapDv:0000000

LinkML Source

Direct

name: life stage
id_prefixes:
- HsapDv
- MmusDv
- ZFS
- FBdv
- WBls
- UBERON
description: A stage of development or growth of an organism, including post-natal
  adult stages
in_subset:
- model_organism_database
from_schema: https://w3id.org/biolink/biolink-model
exact_mappings:
- UBERON:0000105
narrow_mappings:
- HsapDv:0000000
is_a: organismal entity