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Class: MacromolecularMachineMixin

A union of gene locus, gene product, and macromolecular complex. These are the basic units of function in a cell. They either carry out individual biological activities, or they encode molecules which do this.

URI: biolink:MacromolecularMachineMixin

classDiagram class MacromolecularMachineMixin MacromolecularMachineMixin <|-- GeneOrGeneProduct MacromolecularMachineMixin <|-- MacromolecularComplex MacromolecularMachineMixin : name

Inheritance

Slots

Name Cardinality and Range Description Inheritance
name 0..1
SymbolType		 genes are typically designated by a short symbol and a full name direct

Mixin Usage

mixed into description
MacromolecularComplex A stable assembly of two or more macromolecules, i

Usages

used by used in type used
MolecularActivity enabled_by range MacromolecularMachineMixin
ChemicalToChemicalDerivationAssociation catalyst_qualifier range MacromolecularMachineMixin
FunctionalAssociation subject range MacromolecularMachineMixin
MacromolecularMachineToMolecularActivityAssociation subject domain MacromolecularMachineMixin
MacromolecularMachineToMolecularActivityAssociation subject range MacromolecularMachineMixin
MacromolecularMachineToBiologicalProcessAssociation subject domain MacromolecularMachineMixin
MacromolecularMachineToBiologicalProcessAssociation subject range MacromolecularMachineMixin
MacromolecularMachineToCellularComponentAssociation subject domain MacromolecularMachineMixin
MacromolecularMachineToCellularComponentAssociation subject range MacromolecularMachineMixin

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:MacromolecularMachineMixin
native biolink:MacromolecularMachineMixin

LinkML Source

Direct

name: macromolecular machine mixin
description: A union of gene locus, gene product, and macromolecular complex. These
  are the basic units of function in a cell. They either carry out individual biological
  activities, or they encode molecules which do this.
from_schema: https://w3id.org/biolink/biolink-model
mixin: true
slots:
- name
slot_usage:
  name:
    name: name
    description: genes are typically designated by a short symbol and a full name.
      We map the symbol to the default display name and use an additional slot for
      full name
    domain_of:
    - attribute
    - entity
    - macromolecular machine mixin
    range: symbol type