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Class: MacromolecularMachineToCellularComponentAssociation

A functional association between a macromolecular machine (gene, gene product or complex) and a cellular component (as represented in the GO cellular component branch), where the entity carries out its function in the cellular component.

URI: biolink:MacromolecularMachineToCellularComponentAssociation

classDiagram class MacromolecularMachineToCellularComponentAssociation MacromolecularMachineToEntityAssociationMixin <|-- MacromolecularMachineToCellularComponentAssociation FunctionalAssociation <|-- MacromolecularMachineToCellularComponentAssociation MacromolecularMachineToCellularComponentAssociation : aggregator_knowledge_source MacromolecularMachineToCellularComponentAssociation : category MacromolecularMachineToCellularComponentAssociation : description MacromolecularMachineToCellularComponentAssociation : has_attribute MacromolecularMachineToCellularComponentAssociation --|> attribute : has_attribute MacromolecularMachineToCellularComponentAssociation : has_evidence MacromolecularMachineToCellularComponentAssociation --|> evidence type : has_evidence MacromolecularMachineToCellularComponentAssociation : id MacromolecularMachineToCellularComponentAssociation : iri MacromolecularMachineToCellularComponentAssociation : knowledge_source MacromolecularMachineToCellularComponentAssociation : name MacromolecularMachineToCellularComponentAssociation : negated MacromolecularMachineToCellularComponentAssociation : object MacromolecularMachineToCellularComponentAssociation --|> cellular component : object MacromolecularMachineToCellularComponentAssociation : object_category MacromolecularMachineToCellularComponentAssociation --|> ontology class : object_category MacromolecularMachineToCellularComponentAssociation : object_category_closure MacromolecularMachineToCellularComponentAssociation --|> ontology class : object_category_closure MacromolecularMachineToCellularComponentAssociation : object_closure MacromolecularMachineToCellularComponentAssociation : object_label_closure MacromolecularMachineToCellularComponentAssociation : object_namespace MacromolecularMachineToCellularComponentAssociation : original_object MacromolecularMachineToCellularComponentAssociation : original_predicate MacromolecularMachineToCellularComponentAssociation : original_subject MacromolecularMachineToCellularComponentAssociation : predicate MacromolecularMachineToCellularComponentAssociation : primary_knowledge_source MacromolecularMachineToCellularComponentAssociation : publications MacromolecularMachineToCellularComponentAssociation --|> publication : publications MacromolecularMachineToCellularComponentAssociation : qualifiers MacromolecularMachineToCellularComponentAssociation --|> ontology class : qualifiers MacromolecularMachineToCellularComponentAssociation : retrieval_source_ids MacromolecularMachineToCellularComponentAssociation --|> retrieval source : retrieval_source_ids MacromolecularMachineToCellularComponentAssociation : subject MacromolecularMachineToCellularComponentAssociation --|> macromolecular machine mixin : subject MacromolecularMachineToCellularComponentAssociation : subject_category MacromolecularMachineToCellularComponentAssociation --|> ontology class : subject_category MacromolecularMachineToCellularComponentAssociation : subject_category_closure MacromolecularMachineToCellularComponentAssociation --|> ontology class : subject_category_closure MacromolecularMachineToCellularComponentAssociation : subject_closure MacromolecularMachineToCellularComponentAssociation : subject_label_closure MacromolecularMachineToCellularComponentAssociation : subject_namespace MacromolecularMachineToCellularComponentAssociation : timepoint MacromolecularMachineToCellularComponentAssociation : type

Inheritance

Slots

Name Cardinality and Range Description Inheritance
subject 1..1
MacromolecularMachineMixin		 gene, product or macromolecular complex that has the function associated with... Association
predicate 1..1
PredicateType		 A high-level grouping for the relationship type Association
object 1..1
CellularComponent		 class describing the activity, process or localization of the gene product Association
negated 0..1
Boolean		 if set to true, then the association is negated i Association
qualifiers 0..*
OntologyClass		 connects an association to qualifiers that modify or qualify the meaning of t... Association
publications 0..*
Publication		 One or more publications that report the statement expressed in an Associati... Association
has_evidence 0..*
EvidenceType		 connects an association to an instance of supporting evidence Association
knowledge_source 0..1
String		 An Information Resource from which the knowledge expressed in an Association ... Association
primary_knowledge_source 0..1
String		 The most upstream source of the knowledge expressed in an Association that an... Association
aggregator_knowledge_source 0..*
String		 An intermediate aggregator resource from which knowledge expressed in an Asso... Association
timepoint 0..1
TimeType		 a point in time Association
original_subject 0..1
String		 used to hold the original subject of a relation (or predicate) that an extern... Association
original_predicate 0..1
Uriorcurie		 used to hold the original relation/predicate that an external knowledge sourc... Association
original_object 0..1
String		 used to hold the original object of a relation (or predicate) that an externa... Association
subject_category 0..1
OntologyClass		 Used to hold the biolink class/category of an association Association
object_category 0..1
OntologyClass		 Used to hold the biolink class/category of an association Association
subject_closure 0..*
String		 Used to hold the subject closure of an association Association
object_closure 0..*
String		 Used to hold the object closure of an association Association
subject_category_closure 0..*
OntologyClass		 Used to hold the subject category closure of an association Association
object_category_closure 0..*
OntologyClass		 Used to hold the object category closure of an association Association
subject_namespace 0..1
String		 Used to hold the subject namespace of an association Association
object_namespace 0..1
String		 Used to hold the object namespace of an association Association
subject_label_closure 0..*
String		 Used to hold the subject label closure of an association Association
object_label_closure 0..*
String		 Used to hold the object label closure of an association Association
retrieval_source_ids 0..*
RetrievalSource		 A list of retrieval sources that served as a source of knowledge expressed in... Association
id 1..1
String		 A unique identifier for an entity Entity
iri 0..1
IriType		 An IRI for an entity Entity
category 0..*
CategoryType		 Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String		 rdf:type of biolink:Association should be fixed at rdf:Statement Entity
name 0..1
LabelType		 A human-readable name for an attribute or entity Entity
description 0..1
NarrativeText		 a human-readable description of an entity Entity
has_attribute 0..*
Attribute		 connects any entity to an attribute Entity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:MacromolecularMachineToCellularComponentAssociation
native biolink:MacromolecularMachineToCellularComponentAssociation

LinkML Source

Direct

name: macromolecular machine to cellular component association
description: A functional association between a macromolecular machine (gene, gene
  product or complex) and a cellular component (as represented in the GO cellular
  component branch), where the entity carries out its function in the cellular component.
from_schema: https://w3id.org/biolink/biolink-model
is_a: functional association
mixins:
- macromolecular machine to entity association mixin
slot_usage:
  object:
    name: object
    domain_of:
    - association
    range: cellular component