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Class: MolecularActivityToChemicalEntityAssociation

Added in response to capturing relationship between microbiome activities as measured via measurements of blood analytes as collected via blood and stool samples

URI: biolink:MolecularActivityToChemicalEntityAssociation

classDiagram class MolecularActivityToChemicalEntityAssociation Association <|-- MolecularActivityToChemicalEntityAssociation MolecularActivityToChemicalEntityAssociation : aggregator_knowledge_source MolecularActivityToChemicalEntityAssociation : category MolecularActivityToChemicalEntityAssociation : description MolecularActivityToChemicalEntityAssociation : has_attribute MolecularActivityToChemicalEntityAssociation --|> attribute : has_attribute MolecularActivityToChemicalEntityAssociation : has_evidence MolecularActivityToChemicalEntityAssociation --|> evidence type : has_evidence MolecularActivityToChemicalEntityAssociation : id MolecularActivityToChemicalEntityAssociation : iri MolecularActivityToChemicalEntityAssociation : knowledge_source MolecularActivityToChemicalEntityAssociation : name MolecularActivityToChemicalEntityAssociation : negated MolecularActivityToChemicalEntityAssociation : object MolecularActivityToChemicalEntityAssociation --|> chemical entity : object MolecularActivityToChemicalEntityAssociation : object_category MolecularActivityToChemicalEntityAssociation --|> ontology class : object_category MolecularActivityToChemicalEntityAssociation : object_category_closure MolecularActivityToChemicalEntityAssociation --|> ontology class : object_category_closure MolecularActivityToChemicalEntityAssociation : object_closure MolecularActivityToChemicalEntityAssociation : object_label_closure MolecularActivityToChemicalEntityAssociation : object_namespace MolecularActivityToChemicalEntityAssociation : original_object MolecularActivityToChemicalEntityAssociation : original_predicate MolecularActivityToChemicalEntityAssociation : original_subject MolecularActivityToChemicalEntityAssociation : predicate MolecularActivityToChemicalEntityAssociation : primary_knowledge_source MolecularActivityToChemicalEntityAssociation : publications MolecularActivityToChemicalEntityAssociation --|> publication : publications MolecularActivityToChemicalEntityAssociation : qualifiers MolecularActivityToChemicalEntityAssociation --|> ontology class : qualifiers MolecularActivityToChemicalEntityAssociation : retrieval_source_ids MolecularActivityToChemicalEntityAssociation --|> retrieval source : retrieval_source_ids MolecularActivityToChemicalEntityAssociation : subject MolecularActivityToChemicalEntityAssociation --|> molecular activity : subject MolecularActivityToChemicalEntityAssociation : subject_category MolecularActivityToChemicalEntityAssociation --|> ontology class : subject_category MolecularActivityToChemicalEntityAssociation : subject_category_closure MolecularActivityToChemicalEntityAssociation --|> ontology class : subject_category_closure MolecularActivityToChemicalEntityAssociation : subject_closure MolecularActivityToChemicalEntityAssociation : subject_label_closure MolecularActivityToChemicalEntityAssociation : subject_namespace MolecularActivityToChemicalEntityAssociation : timepoint MolecularActivityToChemicalEntityAssociation : type

Inheritance

Slots

Name Cardinality and Range Description Inheritance
subject 1..1
MolecularActivity		 connects an association to the subject of the association Association
predicate 1..1
PredicateType		 A high-level grouping for the relationship type Association
object 1..1
ChemicalEntity		 connects an association to the object of the association Association
negated 0..1
Boolean		 if set to true, then the association is negated i Association
qualifiers 0..*
OntologyClass		 connects an association to qualifiers that modify or qualify the meaning of t... Association
publications 0..*
Publication		 One or more publications that report the statement expressed in an Associati... Association
has_evidence 0..*
EvidenceType		 connects an association to an instance of supporting evidence Association
knowledge_source 0..1
String		 An Information Resource from which the knowledge expressed in an Association ... Association
primary_knowledge_source 0..1
String		 The most upstream source of the knowledge expressed in an Association that an... Association
aggregator_knowledge_source 0..*
String		 An intermediate aggregator resource from which knowledge expressed in an Asso... Association
timepoint 0..1
TimeType		 a point in time Association
original_subject 0..1
String		 used to hold the original subject of a relation (or predicate) that an extern... Association
original_predicate 0..1
Uriorcurie		 used to hold the original relation/predicate that an external knowledge sourc... Association
original_object 0..1
String		 used to hold the original object of a relation (or predicate) that an externa... Association
subject_category 0..1
OntologyClass		 Used to hold the biolink class/category of an association Association
object_category 0..1
OntologyClass		 Used to hold the biolink class/category of an association Association
subject_closure 0..*
String		 Used to hold the subject closure of an association Association
object_closure 0..*
String		 Used to hold the object closure of an association Association
subject_category_closure 0..*
OntologyClass		 Used to hold the subject category closure of an association Association
object_category_closure 0..*
OntologyClass		 Used to hold the object category closure of an association Association
subject_namespace 0..1
String		 Used to hold the subject namespace of an association Association
object_namespace 0..1
String		 Used to hold the object namespace of an association Association
subject_label_closure 0..*
String		 Used to hold the subject label closure of an association Association
object_label_closure 0..*
String		 Used to hold the object label closure of an association Association
retrieval_source_ids 0..*
RetrievalSource		 A list of retrieval sources that served as a source of knowledge expressed in... Association
id 1..1
String		 A unique identifier for an entity Entity
iri 0..1
IriType		 An IRI for an entity Entity
category 0..*
CategoryType		 Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String		 rdf:type of biolink:Association should be fixed at rdf:Statement Entity
name 0..1
LabelType		 A human-readable name for an attribute or entity Entity
description 0..1
NarrativeText		 a human-readable description of an entity Entity
has_attribute 0..*
Attribute		 connects any entity to an attribute Entity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:MolecularActivityToChemicalEntityAssociation
native biolink:MolecularActivityToChemicalEntityAssociation

LinkML Source

Direct

name: molecular activity to chemical entity association
description: Added in response to capturing relationship between microbiome activities
  as measured via measurements of blood analytes as collected via blood and stool
  samples
from_schema: https://w3id.org/biolink/biolink-model
is_a: association
slot_usage:
  subject:
    name: subject
    domain_of:
    - association
    range: molecular activity
  object:
    name: object
    domain_of:
    - association
    range: chemical entity