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Class: PopulationOfIndividualOrganisms

A collection of individuals from the same taxonomic class distinguished by one or more characteristics. Characteristics can include, but are not limited to, shared geographic location, genetics, phenotypes.

URI: biolink:PopulationOfIndividualOrganisms

classDiagram class PopulationOfIndividualOrganisms SubjectOfInvestigation <|-- PopulationOfIndividualOrganisms OrganismalEntity <|-- PopulationOfIndividualOrganisms PopulationOfIndividualOrganisms <|-- StudyPopulation PopulationOfIndividualOrganisms : category PopulationOfIndividualOrganisms : description PopulationOfIndividualOrganisms : full_name PopulationOfIndividualOrganisms : has_attribute PopulationOfIndividualOrganisms --|> attribute : has_attribute PopulationOfIndividualOrganisms : id PopulationOfIndividualOrganisms : in_taxon PopulationOfIndividualOrganisms --|> organism taxon : in_taxon PopulationOfIndividualOrganisms : in_taxon_label PopulationOfIndividualOrganisms : iri PopulationOfIndividualOrganisms : name PopulationOfIndividualOrganisms : provided_by PopulationOfIndividualOrganisms : synonym PopulationOfIndividualOrganisms : type PopulationOfIndividualOrganisms : xref

Inheritance

Slots

Name Cardinality and Range Description Inheritance
in_taxon 0..*
OrganismTaxon		 connects an entity to its taxonomic classification ThingWithTaxon
in_taxon_label 0..1
LabelType		 The human readable scientific name for the taxon of the entity ThingWithTaxon
provided_by 0..*
String		 The value in this node property represents the knowledge provider that create... NamedThing
xref 0..*
Uriorcurie		 A database cross reference or alternative identifier for a NamedThing or edge... NamedThing
full_name 0..1
LabelType		 a long-form human readable name for a thing NamedThing
synonym 0..*
LabelType		 Alternate human-readable names for a thing NamedThing
id 1..1
String		 A unique identifier for an entity Entity
iri 0..1
IriType		 An IRI for an entity Entity
category 1..*
CategoryType		 Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String		 Entity
name 0..1
LabelType		 A human-readable name for an attribute or entity Entity
description 0..1
NarrativeText		 a human-readable description of an entity Entity
has_attribute 0..*
Attribute		 may often be an organism attribute Entity

Usages

used by used in type used
ExposureEventToOutcomeAssociation population_context_qualifier range PopulationOfIndividualOrganisms
VariantToPopulationAssociation object range PopulationOfIndividualOrganisms
PopulationToPopulationAssociation subject range PopulationOfIndividualOrganisms
PopulationToPopulationAssociation object range PopulationOfIndividualOrganisms

Identifier and Mapping Information

Valid ID Prefixes

Instances of this class should have identifiers with one of the following prefixes:

  • HANCESTRO

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:PopulationOfIndividualOrganisms
native biolink:PopulationOfIndividualOrganisms
exact PCO:0000001, SIO:001061, STY:T098, OBI:0000181

LinkML Source

Direct

name: population of individual organisms
id_prefixes:
- HANCESTRO
local_names:
  ga4gh:
    local_name_source: ga4gh
    local_name_value: population
description: A collection of individuals from the same taxonomic class distinguished
  by one or more characteristics.  Characteristics can include, but are not limited
  to, shared geographic location, genetics, phenotypes.
in_subset:
- model_organism_database
from_schema: https://w3id.org/biolink/biolink-model
exact_mappings:
- PCO:0000001
- SIO:001061
- STY:T098
- OBI:0000181
is_a: organismal entity
mixins:
- subject of investigation