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Class: PopulationToPopulationAssociation

An association between a two populations

URI: biolink:PopulationToPopulationAssociation

classDiagram class PopulationToPopulationAssociation Association <|-- PopulationToPopulationAssociation PopulationToPopulationAssociation : aggregator_knowledge_source PopulationToPopulationAssociation : category PopulationToPopulationAssociation : description PopulationToPopulationAssociation : has_attribute PopulationToPopulationAssociation --|> attribute : has_attribute PopulationToPopulationAssociation : has_evidence PopulationToPopulationAssociation --|> evidence type : has_evidence PopulationToPopulationAssociation : id PopulationToPopulationAssociation : iri PopulationToPopulationAssociation : knowledge_source PopulationToPopulationAssociation : name PopulationToPopulationAssociation : negated PopulationToPopulationAssociation : object PopulationToPopulationAssociation --|> population of individual organisms : object PopulationToPopulationAssociation : object_category PopulationToPopulationAssociation --|> ontology class : object_category PopulationToPopulationAssociation : object_category_closure PopulationToPopulationAssociation --|> ontology class : object_category_closure PopulationToPopulationAssociation : object_closure PopulationToPopulationAssociation : object_label_closure PopulationToPopulationAssociation : object_namespace PopulationToPopulationAssociation : original_object PopulationToPopulationAssociation : original_predicate PopulationToPopulationAssociation : original_subject PopulationToPopulationAssociation : predicate PopulationToPopulationAssociation : primary_knowledge_source PopulationToPopulationAssociation : publications PopulationToPopulationAssociation --|> publication : publications PopulationToPopulationAssociation : qualifiers PopulationToPopulationAssociation --|> ontology class : qualifiers PopulationToPopulationAssociation : retrieval_source_ids PopulationToPopulationAssociation --|> retrieval source : retrieval_source_ids PopulationToPopulationAssociation : subject PopulationToPopulationAssociation --|> population of individual organisms : subject PopulationToPopulationAssociation : subject_category PopulationToPopulationAssociation --|> ontology class : subject_category PopulationToPopulationAssociation : subject_category_closure PopulationToPopulationAssociation --|> ontology class : subject_category_closure PopulationToPopulationAssociation : subject_closure PopulationToPopulationAssociation : subject_label_closure PopulationToPopulationAssociation : subject_namespace PopulationToPopulationAssociation : timepoint PopulationToPopulationAssociation : type

Inheritance

Slots

Name Cardinality and Range Description Inheritance
subject 1..1
PopulationOfIndividualOrganisms		 the population that form the subject of the association Association
predicate 1..1
PredicateType		 A relationship type that holds between the subject and object populations Association
object 1..1
PopulationOfIndividualOrganisms		 the population that form the object of the association Association
negated 0..1
Boolean		 if set to true, then the association is negated i Association
qualifiers 0..*
OntologyClass		 connects an association to qualifiers that modify or qualify the meaning of t... Association
publications 0..*
Publication		 One or more publications that report the statement expressed in an Associati... Association
has_evidence 0..*
EvidenceType		 connects an association to an instance of supporting evidence Association
knowledge_source 0..1
String		 An Information Resource from which the knowledge expressed in an Association ... Association
primary_knowledge_source 0..1
String		 The most upstream source of the knowledge expressed in an Association that an... Association
aggregator_knowledge_source 0..*
String		 An intermediate aggregator resource from which knowledge expressed in an Asso... Association
timepoint 0..1
TimeType		 a point in time Association
original_subject 0..1
String		 used to hold the original subject of a relation (or predicate) that an extern... Association
original_predicate 0..1
Uriorcurie		 used to hold the original relation/predicate that an external knowledge sourc... Association
original_object 0..1
String		 used to hold the original object of a relation (or predicate) that an externa... Association
subject_category 0..1
OntologyClass		 Used to hold the biolink class/category of an association Association
object_category 0..1
OntologyClass		 Used to hold the biolink class/category of an association Association
subject_closure 0..*
String		 Used to hold the subject closure of an association Association
object_closure 0..*
String		 Used to hold the object closure of an association Association
subject_category_closure 0..*
OntologyClass		 Used to hold the subject category closure of an association Association
object_category_closure 0..*
OntologyClass		 Used to hold the object category closure of an association Association
subject_namespace 0..1
String		 Used to hold the subject namespace of an association Association
object_namespace 0..1
String		 Used to hold the object namespace of an association Association
subject_label_closure 0..*
String		 Used to hold the subject label closure of an association Association
object_label_closure 0..*
String		 Used to hold the object label closure of an association Association
retrieval_source_ids 0..*
RetrievalSource		 A list of retrieval sources that served as a source of knowledge expressed in... Association
id 1..1
String		 A unique identifier for an entity Entity
iri 0..1
IriType		 An IRI for an entity Entity
category 0..*
CategoryType		 Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String		 rdf:type of biolink:Association should be fixed at rdf:Statement Entity
name 0..1
LabelType		 A human-readable name for an attribute or entity Entity
description 0..1
NarrativeText		 a human-readable description of an entity Entity
has_attribute 0..*
Attribute		 connects any entity to an attribute Entity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:PopulationToPopulationAssociation
native biolink:PopulationToPopulationAssociation

LinkML Source

Direct

name: population to population association
description: An association between a two populations
from_schema: https://w3id.org/biolink/biolink-model
is_a: association
slot_usage:
  subject:
    name: subject
    description: the population that form the subject of the association
    domain_of:
    - association
    range: population of individual organisms
  object:
    name: object
    description: the population that form the object of the association
    domain_of:
    - association
    range: population of individual organisms
  predicate:
    name: predicate
    description: A relationship type that holds between the subject and object populations.
      Standard mereological relations can be used. E.g. subject part-of object, subject
      overlaps object. Derivation relationships can also be used
    domain_of:
    - predicate mapping
    - association
defining_slots:
- subject
- object