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Class: PosttranslationalModification

A chemical modification of a polypeptide or protein that occurs after translation. e.g. polypeptide cleavage to form separate proteins, methylation or acetylation of histone tail amino acids, protein ubiquitination.

URI: biolink:PosttranslationalModification

classDiagram class PosttranslationalModification GeneProductIsoformMixin <|-- PosttranslationalModification BiologicalEntity <|-- PosttranslationalModification PosttranslationalModification : category PosttranslationalModification : description PosttranslationalModification : full_name PosttranslationalModification : has_attribute PosttranslationalModification --|> attribute : has_attribute PosttranslationalModification : id PosttranslationalModification : in_taxon PosttranslationalModification --|> organism taxon : in_taxon PosttranslationalModification : in_taxon_label PosttranslationalModification : iri PosttranslationalModification : name PosttranslationalModification : provided_by PosttranslationalModification : synonym PosttranslationalModification : type PosttranslationalModification : xref

Inheritance

Slots

Name Cardinality and Range Description Inheritance
in_taxon 0..*
OrganismTaxon		 connects an entity to its taxonomic classification ThingWithTaxon
in_taxon_label 0..1
LabelType		 The human readable scientific name for the taxon of the entity ThingWithTaxon
provided_by 0..*
String		 The value in this node property represents the knowledge provider that create... NamedThing
xref 0..*
Uriorcurie		 A database cross reference or alternative identifier for a NamedThing or edge... GeneProductMixin, NamedThing
full_name 0..1
LabelType		 a long-form human readable name for a thing NamedThing
synonym 0..*
LabelType		 Alternate human-readable names for a thing GeneProductMixin, NamedThing
id 1..1
String		 A unique identifier for an entity Entity
iri 0..1
IriType		 An IRI for an entity Entity
category 1..*
CategoryType		 Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String		 Entity
name 0..1
SymbolType		 genes are typically designated by a short symbol and a full name Entity, MacromolecularMachineMixin
description 0..1
NarrativeText		 a human-readable description of an entity Entity
has_attribute 0..*
Attribute		 connects any entity to an attribute Entity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:PosttranslationalModification
native biolink:PosttranslationalModification

LinkML Source

Direct

name: posttranslational modification
description: A chemical modification of a polypeptide or protein that occurs after
  translation.  e.g. polypeptide cleavage to form separate proteins, methylation or
  acetylation of histone tail amino acids,  protein ubiquitination.
from_schema: https://w3id.org/biolink/biolink-model
is_a: biological entity
mixins:
- gene product isoform mixin