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Class: PredicateMapping

A deprecated predicate mapping object contains the deprecated predicate and an example of the rewiring that should be done to use a qualified statement in its place.

URI: biolink:PredicateMapping

classDiagram class PredicateMapping PredicateMapping : anatomical_context_qualifier PredicateMapping : broad_match PredicateMapping --|> named thing : broad_match PredicateMapping : causal_mechanism_qualifier PredicateMapping --|> CausalMechanismQualifierEnum : causal_mechanism_qualifier PredicateMapping : exact_match PredicateMapping --|> named thing : exact_match PredicateMapping : mapped_predicate PredicateMapping : narrow_match PredicateMapping --|> named thing : narrow_match PredicateMapping : object_aspect_qualifier PredicateMapping : object_context_qualifier PredicateMapping : object_derivative_qualifier PredicateMapping : object_direction_qualifier PredicateMapping --|> DirectionQualifierEnum : object_direction_qualifier PredicateMapping : object_form_or_variant_qualifier PredicateMapping : object_part_qualifier PredicateMapping : predicate PredicateMapping : qualified_predicate PredicateMapping : species_context_qualifier PredicateMapping --|> organism taxon : species_context_qualifier PredicateMapping : subject_aspect_qualifier PredicateMapping : subject_context_qualifier PredicateMapping : subject_derivative_qualifier PredicateMapping : subject_direction_qualifier PredicateMapping --|> DirectionQualifierEnum : subject_direction_qualifier PredicateMapping : subject_form_or_variant_qualifier PredicateMapping : subject_part_qualifier

Slots

Name Cardinality and Range Description Inheritance
mapped_predicate 0..1
String
The predicate that is being replaced by the fully qualified representation of... direct
subject_aspect_qualifier 0..1
String
direct
subject_direction_qualifier 0..1
DirectionQualifierEnum
direct
subject_form_or_variant_qualifier 0..1
String
direct
subject_part_qualifier 0..1
String
direct
subject_derivative_qualifier 0..1
String
direct
subject_context_qualifier 0..1
String
direct
predicate 1..1
PredicateType
A high-level grouping for the relationship type direct
qualified_predicate 0..1
String
Predicate to be used in an association when subject and object qualifiers are... direct
object_aspect_qualifier 0..1
String
direct
object_direction_qualifier 0..1
DirectionQualifierEnum
direct
object_form_or_variant_qualifier 0..1
String
direct
object_part_qualifier 0..1
String
direct
object_derivative_qualifier 0..1
String
direct
object_context_qualifier 0..1
String
direct
causal_mechanism_qualifier 0..1
CausalMechanismQualifierEnum
A statement qualifier representing a type of molecular control mechanism thro... direct
anatomical_context_qualifier 0..1
String
A statement qualifier representing an anatomical location where an relationsh... direct
species_context_qualifier 0..1
OrganismTaxon
A statement qualifier representing a taxonomic category of species in which a... direct
exact_match 0..*
NamedThing
holds between two entities that have strictly equivalent meanings, with a hig... direct
narrow_match 0..*
NamedThing
a list of terms from different schemas or terminology systems that have a nar... direct
broad_match 0..*
NamedThing
a list of terms from different schemas or terminology systems that have a bro... direct

Usages

used by used in type used
MappingCollection predicate_mappings range PredicateMapping

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:PredicateMapping
native biolink:PredicateMapping

LinkML Source

Direct

name: predicate mapping
description: A deprecated predicate mapping object contains the deprecated predicate
  and an example of the rewiring that should be done to use a qualified statement
  in its place.
from_schema: https://w3id.org/biolink/biolink-model
slots:
- mapped predicate
- subject aspect qualifier
- subject direction qualifier
- subject form or variant qualifier
- subject part qualifier
- subject derivative qualifier
- subject context qualifier
- predicate
- qualified predicate
- object aspect qualifier
- object direction qualifier
- object form or variant qualifier
- object part qualifier
- object derivative qualifier
- object context qualifier
- causal mechanism qualifier
- anatomical context qualifier
- species context qualifier
- exact match
- narrow match
- broad match