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Class: ProteinFamily

URI: biolink:ProteinFamily

classDiagram class ProteinFamily GeneGroupingMixin <|-- ProteinFamily ChemicalEntityOrGeneOrGeneProduct <|-- ProteinFamily BiologicalEntity <|-- ProteinFamily ProteinFamily : category ProteinFamily : description ProteinFamily : full_name ProteinFamily : has_attribute ProteinFamily --|> attribute : has_attribute ProteinFamily : has_gene_or_gene_product ProteinFamily --|> gene : has_gene_or_gene_product ProteinFamily : id ProteinFamily : in_taxon ProteinFamily --|> organism taxon : in_taxon ProteinFamily : in_taxon_label ProteinFamily : iri ProteinFamily : name ProteinFamily : provided_by ProteinFamily : synonym ProteinFamily : type ProteinFamily : xref

Inheritance

Slots

Name Cardinality and Range Description Inheritance
has_gene_or_gene_product 0..*
Gene		 connects an entity with one or more gene or gene products GeneGroupingMixin
in_taxon 0..*
OrganismTaxon		 connects an entity to its taxonomic classification ThingWithTaxon
in_taxon_label 0..1
LabelType		 The human readable scientific name for the taxon of the entity ThingWithTaxon
provided_by 0..*
String		 The value in this node property represents the knowledge provider that create... NamedThing
xref 0..*
Uriorcurie		 A database cross reference or alternative identifier for a NamedThing or edge... NamedThing
full_name 0..1
LabelType		 a long-form human readable name for a thing NamedThing
synonym 0..*
LabelType		 Alternate human-readable names for a thing NamedThing
id 1..1
String		 A unique identifier for an entity Entity
iri 0..1
IriType		 An IRI for an entity Entity
category 1..*
CategoryType		 Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String		 Entity
name 0..1
LabelType		 A human-readable name for an attribute or entity Entity
description 0..1
NarrativeText		 a human-readable description of an entity Entity
has_attribute 0..*
Attribute		 connects any entity to an attribute Entity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:ProteinFamily
native biolink:ProteinFamily
exact NCIT:C26004, WIKIDATA:Q2278983
narrow SIO:001380, NCIT:C20130, WIKIDATA:Q417841

LinkML Source

Direct

name: protein family
from_schema: https://w3id.org/biolink/biolink-model
exact_mappings:
- NCIT:C26004
- WIKIDATA:Q2278983
narrow_mappings:
- SIO:001380
- NCIT:C20130
- WIKIDATA:Q417841
is_a: biological entity
mixins:
- gene grouping mixin
- chemical entity or gene or gene product