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Class: ReagentTargetedGene

A gene altered in its expression level in the context of some experiment as a result of being targeted by gene-knockdown reagent(s) such as a morpholino or RNAi.

URI: biolink:ReagentTargetedGene

classDiagram class ReagentTargetedGene GenomicEntity <|-- ReagentTargetedGene PhysicalEssence <|-- ReagentTargetedGene OntologyClass <|-- ReagentTargetedGene BiologicalEntity <|-- ReagentTargetedGene ReagentTargetedGene : category ReagentTargetedGene : description ReagentTargetedGene : full_name ReagentTargetedGene : has_attribute ReagentTargetedGene --|> attribute : has_attribute ReagentTargetedGene : has_biological_sequence ReagentTargetedGene : id ReagentTargetedGene : in_taxon ReagentTargetedGene --|> organism taxon : in_taxon ReagentTargetedGene : in_taxon_label ReagentTargetedGene : iri ReagentTargetedGene : name ReagentTargetedGene : provided_by ReagentTargetedGene : synonym ReagentTargetedGene : type ReagentTargetedGene : xref

Inheritance

Slots

Name Cardinality and Range Description Inheritance
has_biological_sequence 0..1
BiologicalSequence		 connects a genomic feature to its sequence GenomicEntity
id 1..1
String		 A unique identifier for an entity Entity, OntologyClass
in_taxon 0..*
OrganismTaxon		 connects an entity to its taxonomic classification ThingWithTaxon
in_taxon_label 0..1
LabelType		 The human readable scientific name for the taxon of the entity ThingWithTaxon
provided_by 0..*
String		 The value in this node property represents the knowledge provider that create... NamedThing
xref 0..*
Uriorcurie		 A database cross reference or alternative identifier for a NamedThing or edge... NamedThing
full_name 0..1
LabelType		 a long-form human readable name for a thing NamedThing
synonym 0..*
LabelType		 Alternate human-readable names for a thing NamedThing
iri 0..1
IriType		 An IRI for an entity Entity
category 1..*
CategoryType		 Name of the high level ontology class in which this entity is categorized Entity
type 0..*
String		 Entity
name 0..1
LabelType		 A human-readable name for an attribute or entity Entity
description 0..1
NarrativeText		 a human-readable description of an entity Entity
has_attribute 0..*
Attribute		 connects any entity to an attribute Entity

Aliases

  • sequence targeting reagent

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

Mappings

Mapping Type Mapped Value
self biolink:ReagentTargetedGene
native biolink:ReagentTargetedGene
exact GENO:0000504

LinkML Source

Direct

name: reagent targeted gene
description: A gene altered in its expression level in the context of some experiment
  as a result of being targeted by gene-knockdown reagent(s) such as a morpholino
  or RNAi.
in_subset:
- model_organism_database
from_schema: https://w3id.org/biolink/biolink-model
aliases:
- sequence targeting reagent
exact_mappings:
- GENO:0000504
is_a: biological entity
mixins:
- genomic entity
- physical essence
- ontology class