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Slot: anatomical_context_qualifier

A statement qualifier representing an anatomical location where an relationship expressed in an association took place (can be a tissue, cell type, or sub-cellular location).

URI: biolink:anatomical_context_qualifier

Inheritance

Applicable Classes

Name Description Modifies Slot
PredicateMapping A deprecated predicate mapping object contains the deprecated predicate and a... no
ChemicalGeneInteractionAssociation describes a physical interaction between a chemical entity and a gene or gene... yes
ChemicalAffectsGeneAssociation Describes an effect that a chemical has on a gene or gene product (e yes
GeneAffectsChemicalAssociation Describes an effect that a gene or gene product has on a chemical entity (e yes

Properties

Examples

Value
blood
cerebral cortext

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/biolink/biolink-model

LinkML Source

name: anatomical context qualifier
description: A statement qualifier representing an anatomical location where an relationship
  expressed in an association took place (can be a tissue, cell type, or sub-cellular
  location).
notes:
- Anatomical context values can be any term from UBERON. For example, the context
  qualifier ‘cerebral cortext’  combines with a core concept of ‘neuron’  to express
  the composed concept ‘neuron in the cerebral cortext’. The species_context_qualifier
  applies  taxonomic context, e.g. species-specific molecular activity.  Ontology
  CURIEs are expected as values  here, the examples below are intended to help clarify
  the content of the CURIEs.
examples:
- value: blood
- value: cerebral cortext
in_subset:
- translator_minimal
from_schema: https://w3id.org/biolink/biolink-model
is_a: statement qualifier
domain: association
alias: anatomical_context_qualifier
domain_of:
- predicate mapping
- chemical gene interaction association
- chemical affects gene association
- gene affects chemical association
range: string