Slot: phenotypic_state
in experiments (e.g. gene expression) assaying diseased or unhealthy tissue, the phenotypic state can be put here, e.g. MONDO ID. For healthy tissues, use XXX.
Inheritance
- association_slot
- phenotypic_state
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| GeneExpressionMixin | Observed gene expression intensity, context (site, stage) and associated phen... | no |
| GeneToGeneCoexpressionAssociation | Indicates that two genes are co-expressed, generally under the same condition... | no |
| VariantToGeneExpressionAssociation | An association between a variant and expression of a gene (i | no |
Properties
- Range: DiseaseOrPhenotypicFeature
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/biolink/biolink-model
LinkML Source
name: phenotypic state
description: in experiments (e.g. gene expression) assaying diseased or unhealthy
tissue, the phenotypic state can be put here, e.g. MONDO ID. For healthy tissues,
use XXX.
from_schema: https://w3id.org/biolink/biolink-model
is_a: association slot
domain: association
alias: phenotypic_state
domain_of:
- gene expression mixin
range: disease or phenotypic feature